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Northern blot + imageJ + homework helpModerator: BioTeam
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Northern blot + imageJ + homework helpI'm not sure what to do so I'm going to explain what I did up to date and where I'm having trouble
So I have to analyze a northern blot using the computer program imageJ (the northern blots are either ADH in glucose/glycerol at 2 or 16 hours) So I use the box thing to create boxes around my lanes (crtl+1, crtl+2) of ADH transcripts then crtl+3 makes a graph appear in the example I got the graph looks a lot different. I have peaks and the example has valleys. but I'm told to find the area of the valleys so I kinda did my best in that manner. So I'm left with data (that's automatically put into excel) some of my graphs have 3 numbers attached to them, whereas some have 5. (because of the number of valleys) So I added all of the values of the area and put them into a table Now I am given a unit of enzyme like a control that I'm supposed to normalize with. there's 4 lanes on this control different concentrations. I'm not sure what to do to normalize. I'm guessing doing the [highest concentration - 0 concentration (for area) -control ] / ADH found in lanes that are not control. However, I'm left with a ruler on the image and really not knowing what to do with that. So my questions are: I'm I doing this wrong? Why is there a ruler?
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