As a first step toward the elucidation of the systems biology of …

• Abstract
• Introduction
• Experimental Procedures
• Results
• Discussion
• References
• Figures
• Reactions

Biology Articles » Biomathematics » A Mathematical Model for the Branched Chain Amino Acid Biosynthetic Pathways of Escherichia coli K12 » References

References

- A Mathematical Model for the Branched Chain Amino Acid Biosynthetic Pathways of Escherichia coli K12

REFERENCES  
Umbarger, H. E. (1978) Annu. Rev. Biochem. 47, 532–606 Umbarger, H. E. (1996) in Escherichia coli and Salmonella: Cellular and Molecular Biology (Neidhardt, F. C., Curtiss, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M., and Umbarger, H. E., eds) 2nd Ed., pp. 442–457, American Society for Microbiology Press, Washington, D. C. Hatfield, G. W., and Benham, C. J. (2002) Annu. Rev. Genet. 36, 175–203 Barak, Z., Chipman, D. M., and Gollop, N. (1987) J. Bacteriol. 169, 3750–3756 Lawther, R. P., Calhoun, D. H., Gray, J., Adams, C. W., Hauser, C. A., and Hatfield, G. W. (1982) J. Bacteriol. 149, 294–298 Umbarger, H. E., and Brown, B. (1955) J. Bacteriol. 70, 241–248 Monod, J., Wyman, J., and Changeux, J. P. (1965) J. Mol. Biol. 12, 88–118 Hatfield, G. W., and Umbarger, H. E. (1970) J. Biol. Chem. 245, 1742–1747 Changeux, J. P. (1963) Cold Spring Harbor Symp. Quant. Biol. 28, 497–504 Yang, C.-R., Shapiro, B. E., Mjolsness, E. D., and Hatfield, G. W. (2005) Bioinformatics 21, in press Shapiro, B. E., Levchenko, A., Meyerowitz, E. M., Wold, B. J., and Mjolsness, E. D. (2003) Bioinformatics 19, 677–678 Edwards, J. S., Ibarra, R. U., and Palsson, B. O. (2001) Nat. Biotechnol. 19, 125–130 Herring, P. A., McKnight, B. L., and Jackson, J. H. (1995) Biochem. Biophys. Res. Commun. 207, 48–54 Segel, I. H. (1993) Enzyme Kinetics: Behavior and Analysis of Rapid Equilibrium and Steady State Enzyme Systems, p. 427, John Wiley & Sons, Inc., New York Hatfield, G. W. (1970) The Regulation of L-Threonine Deaminase in Bacillus subtilis by Repression and Endproduct Inhibition. Ph.D. thesis, pp. 103–112, Purdue University Calhoun, D. H., Rimerman, R. A., and Hatfield, G. W. (1973) J. Biol. Chem. 248, 3511–3516 Arfin, S. M., Long, A. D., Ito, E. T., Tolleri, L., Riehle, M. M., Paegle, E. S., and Hatfield, G. W. (2000) J. Biol. Chem. 275, 29672–29684 Futcher, B., Latter, G. I., Monardo, P., McLaughlin, C. S., and Garrels, J. I. (1999) Mol. Cell. Biol. 19, 7357–7368 Ideker, T., Thorsson, V., Ranish, J. A., Christmas, R., Buhler, J., Eng, J. K., Bumgarner, R., Goodlett, D. R., Aebersold, R., and Hood, L. (2001) Science 292, 929–934 Hung, S. P., Baldi, P., and Hatfield, G. W. (2002) J. Biol. Chem. 277, 40309–40323 Epelbaum, S., LaRossa, R. A., VanDyk, T. K., Elkayam, T., Chipman, D. M., and Barak, Z. (1998) J. Bacteriol. 180, 4056–4067 Quay, S. C., Dick, T. E., and Oxender, D. L. (1977) J. Bacteriol. 129, 1257–1265 Jackson, J. H., Herring, P. A., Patterson, E. B., and Blatt, J. M. (1993) Biochimie (Paris) 75, 759–765 Daniel, J., Dondon, L., and Danchin, A. (1983) Mol. Gen. Genet. 190, 452–458 Danchin, A., Dondon, L., and Daniel, J. (1984) Mol. Gen. Genet. 193, 473–478 Adams, C. W., Rosenberg, M., and Hatfield, G. W. (1985) J. Biol. Chem. 260, 8538–8544 Hashiguchi, K., Takesada, H., Suzuki, E., and Matsui, H. (1999) Biosci. Biotechnol. Biochem. 63, 672–679 Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., and Kanehisa, M. (1999) Nucleic Acids Res. 27, 29–34 Gasteiger, E., Gattiker, A., Hoogland, C., Ivanyi, I., Appel, R. D., and Bairoch, A. (2003) Nucleic Acids Res. 31, 3784–3788 Schomburg, I., Chang, A., Ebeling, C., Gremse, M., Heldt, C., Huhn, G., and Schomburg, D. (2004) Nucleic Acids Res. 32, D431–D433 Selkov, E., Basmanova, S., Gaasterland, T., Goryanin, I., Gretchkin, Y., Maltsev, N., Nenashev, V., Overbeek, R., Panyushkina, E., Pronevitch, L., Selkov, E., Jr., and Yunus, I. (1996) Nucleic Acids Res. 24, 26–28 Karp, P. D., Riley, M., Saier, M., Paulsen, I. T., Collado-Vides, J., Paley, S. M., Pellegrini-Toole, A., Bonavides, C., and Gama-Castro, S. (2002) Nucleic Acids Res. 30, 56–58 Falk, S., Guay, A., Chenu, C., Patil, S. D., and Berteloot, A. (1998) Biophys. J. 74, 816–830 Reed, J. L., Vo, T. D., Schilling, C. H., and Palsson, B. O. (2003) Genome. Biol. http://genomebiology.com/2003/4/9/R54 Neidhardt, F. C., and Curtiss, R. (1996) in Escherichia coli and Salmonella: Cellular and Molecular Biology (Neidhardt, F. C., Curtiss, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M., and Umbarger, H. E., eds) 2nd Ed., pp. 1310–1324, American Society for Microbiology Press, Washington, D. C. McAdams, H. H., and Arkin, A. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 814–819 Gillespie, D. T. (1977) J. Phys. Chem. 81, 2340–2361 Gillespie, D. T. (2000) J. Chem. Phys. 113, 297–306